| E J TRANSPORT LLCRensselaer, NY | 1410446 | 44 |
| E-Z MOVERS INCRochester, NY | 495911 | 3 |
| E-Z TRIPS LOGISTICS INCNew Windsor, NY | 4168275 | 1 |
| EAGER TRUCKING CORPORATIONNew York, NY | 3641305 | 1 |
| EAGLE TRANSFER CORPNew York, NY | 117357 | 7 |
| EAGLE XPRESS TRUCKING INCRochester, NY | 3704508 | 2 |
| EAST COAST IMPERIAL LLCValley Stream, NY | 4440952 | 1 |
| EAST COAST LAWN & LANDSCAPINGSyracuse, NY | 3172179 | 2 |
| EASTERN XPRESS INCRochester, NY | 3553624 | 7 |
| EASTMAN KODAK COMPANYRochester, NY | 94370 | 3 |
| ECONOMY TRANSPORT CORPORATIONRochester, NY | 268777 | 9 |
| ED HERRINGTON INCHillsdale, NY | 19630 | 42 |
| EDIKAS DUMPISBrooklyn, NY | 3017245 | 1 |
| EDWARD ARNOLD SCRAP PROCESSORS INCCorfu, NY | 55418 | 22 |
| EFFES EXPRESS INCRochester, NY | 2559393 | 3 |
| EL EXPRESO POLAR INCWestbury, NY | 4557568 | 1 |
| ELEVATED ASPHALTSchenectady, NY | 4574984 | 1 |
| ELI FRIED INCBrooklyn, NY | 1434308 | 1 |
| ELITE COACH INCLong Is City, NY | 3153786 | 3 |
| ELITE FURNITURE DELIVERY SERVICES LI CORPOakdale, NY | 4357899 | 2 |
| ELLAX LLCRochester, NY | 3059941 | 1 |
| EMI HAULING CORPHighland Mills, NY | 3856582 | 1 |
| EMMANUEL 99 LLCStaten Island, NY | 4574785 | 1 |
| EMPIRE AUTO TRANSPORTATION GROUP INCSyracuse, NY | 1427959 | 17 |
| EMPIRE EQUIPMENT INCBrooklyn, NY | 1734272 | 5 |
| EMPIRE EXPRESS LLCRocherster, NY | 2018915 | 1 |
| EMPIRE SAFE COMPANYNew York, NY | 194685 | 2 |
| EN ROOT LOGISTICS LLCNewburgh, NY | 4375983 | 1 |
| ENDICOTT TRUCKING COMPANY INCBinghamton, NY | 94385 | 3 |
| ENERGY FUEL INCDix Hills, NY | 4506822 | 12 |
| EQUIPCO LLCBellport, NY | 3395243 | 1 |
| ERIC DNISTRIANCallicoon, NY | 4055724 | 1 |
| ERIC W SLOCUMCorning, NY | 1615463 | 1 |
| ERIE LOGISTICS LLCLancaster, NY | 1043805 | 47 |
| ERIN AND BILL'S AUTOMOTIVE AND TRANSPORT INCAmherst, NY | 878835 | 5 |
| ERIN'S AUTOMOTIVE CENTER INCAmherst, NY | 3798639 | 8 |
| ERKIN FREIGHT INCBrooklyn, NY | 4381189 | 11 |
| ERL INTERMODAL CORPORATIONUtica, NY | 2257949 | 46 |
| ESHER TRANSPORT LLCAmherst, NY | 3620561 | 1 |
| ESSENTIAL CARGO INCHilton, NY | 3673795 | 10 |
| ESTRADE FERNANDOCorona, NY | 5942 | 1 |
| EUN SIK NOHFlushing, NY | 1003878 | 1 |
| EVERGREEN TRUCKLINE INCAmherst, NY | 3722367 | 1 |
| EXCELENCE INCBrooklyn, NY | 4474028 | 12 |
| EXCELLENT BUS SERVICE INCMonticello, NY | 586526 | 12 |
| EXPERIENCED BRICK AND STONE LLCBuffalo, NY | 2873551 | 1 |
| EXPLO POWDER INCBronx, NY | 16850 | 1 |
| EXPRESS MILK & DAIRY PRODUCTS CORPYonkers, NY | 1663424 | 2 |